Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919185.1_cds_XP_016468441.1_61078
CDS Infomation

[gene=LOC107790976] [db_xref=GeneID:107790976] [protein=beta-catenin-like protein 1] [protein_id=XP_016468441.1] [location=complement(join(155859..155948,156516..156597,156684..156721,156837..156893,156985..157045,157192..157288,158548..158629,159402..160493))] [gbkey=CDS]
Sequence

ATGGAAGCAGCAAAACGCAAGCGAAACTCTGCCGAATATGAAGATGATGAATATGAAACC
TTCAGACCGCCGCCGCCATCCTCCGCCGCGTCAAACGGCGGCATTGACCTATCACTACTC
GAAGCCCTAGAAAAATCTCAACAAAACCCCGTGGAAGCTCTCGATCTCAAAACAGTGAAA
AAATTCGTCCTTTCATTCGAACGACGTCTTAAGGAAAATATTGCTGCCCGTCTCAAGTAC
CCGGACCAACCCGAGAAGTTCGCGGATTCCGAAGTCGAGCTCCATGAAGAAATCGAAAAG
CTTAAAATCGTCGCCGGAGGCCCAGAGTTTTACCCGGAACTTGTCAATCTCGGCACCGTT
GCTTCAATCACCAGCCTCCTCAATCACGAAAACACGGATATCGCTATTGACGTTGTCGGC
TTATTACAAGACCTAACTGATGAGGATGTTCTCGAGGACAACGACGAGCCGGCGCAAGTC
TTAGTTGATGCATTGGTCGAGAACAATGCATTAGAATTACTCGTTCAGCTTCTAGGAAAA
TTATCCGATTCCGATCCCGACGAGTCCGCCGCCATTTACAGTATACTCGCGACTATTGAG
AATTTCATCGAAGTGAAAACCTCGGTGGCTGAGCTCGTATGCGAAAGGACGAAGTTAATG
AAGTGGTTATTGACAAGGATAAAAGTTAGAGAATTTGATGGAAACAAGCAGTATGCATCG
GAAATTTTGGCGATTCTGCTGCAGAGCAGCACGGGGAATCAGAAGAGATTAGGGCAATTG
AACGGCGTGGATGCGTTGTTACAAGCTGTGGCAATGTATAAATCAAAGGACCCTAAGTCG
CCAGATGAGGAGGAGATGGTGGAGAACTTGTTTGACGCGTTGTGCTGTTTGTTAATGCCG
TTGGAGAATAAGGAGAGGTTTGTGAAATCTGAAGGAGTAGAATTGATGATCATTATAATG
AATCAGAAGAAAATGTGTTATGGGTCGGCTATAAGGGCTTTAGATTTTGCTATGACTAAT
TATCCTCCAGCATGTGAGAGGTTTGTGGATGTAATGGGGTTAAAGACTGCTTTTCCAGCT
TTCATGGGTAAGATACCTCTGAGCAAAAAGAACAAGAAACGCTACAAAGAAGAACTGGAA
GAGCGTCTTGTATCACTAGTTGCTTCCTTATTTGGAGGAATCTTGAGAGGTTCTAGAAGG
GATAGATTGTTAAGTAAGTTTGTGGAGAACGAGTGCGAAAAAATTGACAGGCTTATGGAA
CTCTACATGAGATATTCCAATAGAGTGAAACTTGAGGCTGAACGGTTTGACCAGCTAGAA
CTTGATGATTTGATGGATGAAGATGAGAAGTACAATAGGAAGTTAGGAGCTGGACTTTAC
ACTCTTCAGTTGATAGCTGTTATCCTGGGTCATCTTTGGACCTCTGAGCATCCTCGTATC
AGAGCAAGGATTGAACTTTTGCTAAAGCAACAAAAGCTGACTAAGCAAGACGTAAAAGAT
ATACTTCAGGAATATCATGACAACATAGGAGATCTGGAAGGGCCAGAAGAGAAGGAGAGG
GCACAATCCAAGATTCAAAGGTTCATCTCGGCCTTTTGA

Peptide Sequence

PEP ID

XP_016468441.1
PEP Infomation

PREDICTED: beta-catenin-like protein 1 [Nicotiana tabacum]
Sequence

MEAAKRKRNSAEYEDDEYETFRPPPPSSAASNGGIDLSLLEALEKSQQNPVEALDLKTVK
KFVLSFERRLKENIAARLKYPDQPEKFADSEVELHEEIEKLKIVAGGPEFYPELVNLGTV
ASITSLLNHENTDIAIDVVGLLQDLTDEDVLEDNDEPAQVLVDALVENNALELLVQLLGK
LSDSDPDESAAIYSILATIENFIEVKTSVAELVCERTKLMKWLLTRIKVREFDGNKQYAS
EILAILLQSSTGNQKRLGQLNGVDALLQAVAMYKSKDPKSPDEEEMVENLFDALCCLLMP
LENKERFVKSEGVELMIIIMNQKKMCYGSAIRALDFAMTNYPPACERFVDVMGLKTAFPA
FMGKIPLSKKNKKRYKEELEERLVSLVASLFGGILRGSRRDRLLSKFVENECEKIDRLME
LYMRYSNRVKLEAERFDQLELDDLMDEDEKYNRKLGAGLYTLQLIAVILGHLWTSEHPRI
RARIELLLKQQKLTKQDVKDILQEYHDNIGDLEGPEEKERAQSKIQRFISAF

Transcript Sequence

Gene sequence data has not been registered.